AT5G07630

Description : lipid transporters

Gene families : OG0005154 (Archaeplastida) Phylogenetic Tree(s): OG0005154_tree ,
OG_05_0006209 (LandPlants) Phylogenetic Tree(s): OG_05_0006209_tree ,
OG_06_0006999 (SeedPlants) Phylogenetic Tree(s): OG_06_0006999_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G07630
Cluster	HCCA: Cluster_240

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00063p00176210	evm_27.TU.AmTr_v1...	Solute transport.carrier-mediated transport.MOP...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000280	nuclear division	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
CC	GO:0016020	membrane	ISS	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0048285	organelle fission	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	Neighborhood
MF	GO:0000182	rDNA binding	IEP	Neighborhood
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	Neighborhood
BP	GO:0002252	immune effector process	IEP	Neighborhood
MF	GO:0004525	ribonuclease III activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
CC	GO:0005759	mitochondrial matrix	IEP	Neighborhood
BP	GO:0006349	regulation of gene expression by genetic imprinting	IEP	Neighborhood
BP	GO:0006360	transcription by RNA polymerase I	IEP	Neighborhood
BP	GO:0006730	one-carbon metabolic process	IEP	Neighborhood
BP	GO:0007267	cell-cell signaling	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008097	5S rRNA binding	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0008841	dihydrofolate synthase activity	IEP	Neighborhood
BP	GO:0009615	response to virus	IEP	Neighborhood
BP	GO:0009616	virus induced gene silencing	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0009960	endosperm development	IEP	Neighborhood
BP	GO:0010050	vegetative phase change	IEP	Neighborhood
BP	GO:0010216	maintenance of DNA methylation	IEP	Neighborhood
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	Neighborhood
MF	GO:0010348	lithium:proton antiporter activity	IEP	Neighborhood
BP	GO:0010352	lithium ion export across the plasma membrane	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Neighborhood
MF	GO:0016208	AMP binding	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
BP	GO:0016926	protein desumoylation	IEP	Neighborhood
MF	GO:0016929	SUMO-specific protease activity	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
BP	GO:0023052	signaling	IEP	Neighborhood
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	Neighborhood
BP	GO:0031050	dsRNA fragmentation	IEP	Neighborhood
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Neighborhood
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	Neighborhood
BP	GO:0035821	modification of morphology or physiology of other organism	IEP	Neighborhood
BP	GO:0040029	regulation of gene expression, epigenetic	IEP	Neighborhood
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044003	modification by symbiont of host morphology or physiology	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044419	interspecies interaction between organisms	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
BP	GO:0045727	positive regulation of translation	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Neighborhood
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051607	defense response to virus	IEP	Neighborhood
BP	GO:0051701	interaction with host	IEP	Neighborhood
BP	GO:0051817	modification of morphology or physiology of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052018	modulation by symbiont of RNA levels in host	IEP	Neighborhood
BP	GO:0052249	modulation of RNA levels in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	Neighborhood
BP	GO:0071514	genetic imprinting	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood
MF	GO:0080084	5S rDNA binding	IEP	Neighborhood
BP	GO:0080156	mitochondrial mRNA modification	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:0098586	cellular response to virus	IEP	Neighborhood
BP	GO:0140115	export across plasma membrane	IEP	Neighborhood
BP	GO:1900864	mitochondrial RNA modification	IEP	Neighborhood
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Neighborhood
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007594	RFT1	105	602

External Links

No external refs found!

AT5G07630

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation