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  5. MA_10329277g0010

MA_10329277g0010


Description : Carbamoyl-phosphate synthase large chain, chloroplastic OS=Arabidopsis thaliana (sp|q42601|carb_arath : 624.0)


Gene families : OG0003051 (Archaeplastida) Phylogenetic Tree(s): OG0003051_tree ,
OG_05_0004347 (LandPlants) Phylogenetic Tree(s): OG_05_0004347_tree ,
OG_06_0075898 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10329277g0010
Cluster HCCA: Cluster_495

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00226690 evm_27.TU.AmTr_v1... Nucleotide metabolism.pyrimidines.ribonucleotide... 0.04 Archaeplastida
AT1G29900 CARB carbamoyl phosphate synthetase B 0.05 Archaeplastida
GSVIVT01025125001 No alias Nucleotide metabolism.pyrimidines.ribonucleotide... 0.02 Archaeplastida
LOC_Os01g38970.1 No alias large subunit of carbamoyl phosphate synthetase... 0.02 Archaeplastida
Pp3c1_18250V3.1 No alias carbamoyl phosphate synthetase B 0.02 Archaeplastida
Solyc06g075340.4.1 No alias large subunit of carbamoyl phosphate synthetase... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
CC GO:0035658 Mon1-Ccz1 complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 266 395
IPR005480 CarbamoylP_synth_lsu_oligo 45 127
No external refs found!