1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G21530

AT1G21530


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0000413 (Archaeplastida) Phylogenetic Tree(s): OG0000413_tree ,
OG_05_0000299 (LandPlants) Phylogenetic Tree(s): OG_05_0000299_tree ,
OG_06_0000164 (SeedPlants) Phylogenetic Tree(s): OG_06_0000164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G21530
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G68270 No alias AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
AT5G16340 No alias AMP-dependent synthetase and ligase family protein 0.08 Archaeplastida
GSVIVT01013358001 No alias Probable acyl-activating enzyme 1, peroxisomal... 0.03 Archaeplastida
Gb_11685 No alias Probable acyl-activating enzyme 6 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g24030.1 No alias Probable acyl-activating enzyme 1, peroxisomal... 0.02 Archaeplastida
MA_123970g0010 No alias Probable acyl-activating enzyme 5, peroxisomal... 0.06 Archaeplastida
MA_9579g0010 No alias Probable acyl-activating enzyme 6 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g043660.3.1 No alias Probable acyl-activating enzyme 2 OS=Arabidopsis... 0.02 Archaeplastida
Solyc08g075800.1.1 No alias Probable acyl-activating enzyme 1, peroxisomal... 0.07 Archaeplastida
Zm00001e030943_P001 No alias Probable acyl-activating enzyme 5, peroxisomal... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0033037 polysaccharide localization IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
BP GO:0036294 cellular response to decreased oxygen levels IEP Neighborhood
BP GO:0052542 defense response by callose deposition IEP Neighborhood
BP GO:0052545 callose localization IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0071453 cellular response to oxygen levels IEP Neighborhood
BP GO:0071456 cellular response to hypoxia IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 22 443
IPR025110 AMP-bd_C 452 533
No external refs found!