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  5. MA_10353668g0010

MA_10353668g0010


Description : pectate lyase


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10353668g0010
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AT3G07010 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G27400 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT4G13210 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT4G22080 RHS14 root hair specific 14 0.02 Archaeplastida
AT5G04310 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01016209001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01028548001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
MA_203992g0010 No alias pectate lyase 0.04 Archaeplastida
MA_204440g0010 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.03 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.03 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.04 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.02 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c2_9460V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Solyc02g080910.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc11g008140.3.1 No alias pectate lyase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR002022 Pec_lyase 155 339
No external refs found!