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  5. MA_103763g0010

MA_103763g0010


Description : Auxin response factor 6 OS=Arabidopsis thaliana (sp|q9ztx8|arff_arath : 246.0)


Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0009308 (LandPlants) Phylogenetic Tree(s): OG_05_0009308_tree ,
OG_06_0012392 (SeedPlants) Phylogenetic Tree(s): OG_06_0012392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_103763g0010
Cluster HCCA: Cluster_466

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019566001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01025691001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01032251001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
GSVIVT01037136001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
Gb_23328 No alias transcription factor (ARF) 0.03 Archaeplastida
Gb_39685 No alias transcription factor (ARF) 0.05 Archaeplastida
Gb_39686 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os02g06910.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os04g57610.1 No alias transcription factor (ARF) 0.04 Archaeplastida
LOC_Os05g43920.1 No alias transcription factor (ARF) 0.04 Archaeplastida
LOC_Os05g48870.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os06g46410.1 No alias transcription factor (ARF) 0.02 Archaeplastida
LOC_Os08g40900.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os11g32110.1 No alias transcription factor (ARF) 0.06 Archaeplastida
LOC_Os12g41950.1 No alias transcription factor (ARF) 0.04 Archaeplastida
MA_10022392g0010 No alias transcription factor (ARF) 0.03 Archaeplastida
Mp1g12750.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Pp3c1_40270V3.1 No alias auxin response factor 6 0.02 Archaeplastida
Smo117217 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
Solyc05g056040.3.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Solyc06g075150.3.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e003229_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e006577_P003 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e016366_P002 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e018126_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e020205_P004 No alias transcription factor (ARF) 0.07 Archaeplastida
Zm00001e030325_P003 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e032423_P002 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e041910_P003 No alias transcription factor (ARF) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 385 475
No external refs found!