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  5. AT5G08695

AT5G08695


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0004709 (Archaeplastida) Phylogenetic Tree(s): OG0004709_tree ,
OG_05_0005978 (LandPlants) Phylogenetic Tree(s): OG_05_0005978_tree ,
OG_06_0005881 (SeedPlants) Phylogenetic Tree(s): OG_06_0005881_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08695
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT5G05720 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0072488 ammonium transmembrane transport IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 6 72
IPR000504 RRM_dom 538 610
IPR000504 RRM_dom 423 484
IPR000504 RRM_dom 229 299
IPR000504 RRM_dom 637 668
No external refs found!