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Description : RING/FYVE/PHD zinc finger superfamily protein
Gene families : OG0007681 (Archaeplastida) Phylogenetic Tree(s): OG0007681_tree ,
OG_05_0008362 (LandPlants) Phylogenetic Tree(s): OG_05_0008362_tree ,
OG_06_0006484 (SeedPlants) Phylogenetic Tree(s): OG_06_0006484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G08750 | |
| Cluster | HCCA: Cluster_11 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005673 | transcription factor TFIIE complex | IEP | Neighborhood |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Neighborhood |
| BP | GO:0006857 | oligopeptide transport | IEP | Neighborhood |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Neighborhood |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0009830 | cell wall modification involved in abscission | IEP | Neighborhood |
| BP | GO:0009900 | dehiscence | IEP | Neighborhood |
| BP | GO:0009901 | anther dehiscence | IEP | Neighborhood |
| BP | GO:0010047 | fruit dehiscence | IEP | Neighborhood |
| BP | GO:0010048 | vernalization response | IEP | Neighborhood |
| BP | GO:0010393 | galacturonan metabolic process | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| BP | GO:0022411 | cellular component disassembly | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0044277 | cell wall disassembly | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0045488 | pectin metabolic process | IEP | Neighborhood |
| BP | GO:0045490 | pectin catabolic process | IEP | Neighborhood |
| BP | GO:0048235 | pollen sperm cell differentiation | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 120 | 156 |
| No external refs found! |