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  5. AT1G21620

AT1G21620 (APUM20, PUM20)


Aliases : APUM20, PUM20

Description : pumilio 20


Gene families : OG0012954 (Archaeplastida) Phylogenetic Tree(s): OG0012954_tree ,
OG_05_0012912 (LandPlants) Phylogenetic Tree(s): OG_05_0012912_tree ,
OG_06_0012946 (SeedPlants) Phylogenetic Tree(s): OG_06_0012946_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G21620
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AT1G35850 PUM17, APUM17 pumilio 17 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
BP GO:0009556 microsporogenesis IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0033037 polysaccharide localization IEP Neighborhood
BP GO:0034293 sexual sporulation IEP Neighborhood
BP GO:0043934 sporulation IEP Neighborhood
BP GO:0048236 plant-type sporogenesis IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:0052386 cell wall thickening IEP Neighborhood
BP GO:0052543 callose deposition in cell wall IEP Neighborhood
BP GO:0052545 callose localization IEP Neighborhood
MF GO:0080072 spermidine:sinapoyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080089 sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 172 193
No external refs found!