MA_103920g0010


Description : transcription factor (TUB)


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree ,
OG_06_0000341 (SeedPlants) Phylogenetic Tree(s): OG_06_0000341_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_103920g0010
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.04 Archaeplastida
Cpa|evm.model.tig00000367.38 No alias RNA biosynthesis.transcriptional activation.TUB... 0.01 Archaeplastida
Gb_22686 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os12g06630.2 No alias transcription factor (TUB) 0.04 Archaeplastida
Zm00001e016851_P001 No alias transcription factor (TUB) 0.02 Archaeplastida
Zm00001e019166_P001 No alias transcription factor (TUB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000007 Tubby_C 1 228
No external refs found!