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  5. MA_10425891g0010

MA_10425891g0010


Description : BIG auxin transport regulator protein


Gene families : OG0001460 (Archaeplastida) Phylogenetic Tree(s): OG0001460_tree ,
OG_05_0004241 (LandPlants) Phylogenetic Tree(s): OG_05_0004241_tree ,
OG_06_0005517 (SeedPlants) Phylogenetic Tree(s): OG_06_0005517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10425891g0010
Cluster HCCA: Cluster_491

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248360 evm_27.TU.AmTr_v1... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.12 Archaeplastida
AMTR_s00090p00114080 evm_27.TU.AmTr_v1... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.09 Archaeplastida
AT3G02260 DOC1, ASA1,... auxin transport protein (BIG) 0.19 Archaeplastida
Cpa|evm.model.tig00000158.22 No alias Auxin transport protein BIG OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01036538001 No alias Phytohormones.auxin.transport.polar auxin transport.BIG... 0.15 Archaeplastida
Gb_03145 No alias BIG auxin transport regulator protein 0.1 Archaeplastida
LOC_Os09g07300.1 No alias BIG auxin transport regulator protein 0.14 Archaeplastida
MA_10437010g0010 No alias No annotation 0.12 Archaeplastida
MA_10437010g0030 No alias Auxin transport protein BIG OS=Oryza sativa subsp.... 0.12 Archaeplastida
MA_141071g0010 No alias Auxin transport protein BIG OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_14729g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_18467g0010 No alias Auxin transport protein BIG OS=Oryza sativa subsp.... 0.13 Archaeplastida
MA_92502g0010 No alias Rac-like GTP-binding protein 7 OS=Oryza sativa subsp.... 0.1 Archaeplastida
Mp2g04600.1 No alias BIG auxin transport regulator protein 0.06 Archaeplastida
Pp3c11_22340V3.1 No alias auxin transport protein (BIG) 0.05 Archaeplastida
Pp3c7_7030V3.1 No alias auxin transport protein (BIG) 0.02 Archaeplastida
Smo141341 No alias Phytohormones.auxin.transport.polar auxin transport.BIG... 0.06 Archaeplastida
Solyc02g089260.4.1 No alias BIG auxin transport regulator protein 0.08 Archaeplastida
Zm00001e033628_P002 No alias BIG auxin transport regulator protein 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025704 E3_Ub_ligase_UBR4 1127 2065
IPR000433 Znf_ZZ 131 163
No external refs found!