- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana (sp|q9lig0|y3136_arath : 242.0)
Gene families : OG0001115 (Archaeplastida) Phylogenetic Tree(s): OG0001115_tree ,
OG_05_0002399 (LandPlants) Phylogenetic Tree(s): OG_05_0002399_tree ,
OG_06_0001732 (SeedPlants) Phylogenetic Tree(s): OG_06_0001732_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10425962g0020 | |
| Cluster | HCCA: Cluster_389 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00056p00140230 | evm_27.TU.AmTr_v1... | Clavaminate synthase-like protein At3g21360... | 0.03 | Archaeplastida | |
| AMTR_s00071p00130010 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
| AMTR_s00071p00131570 | evm_27.TU.AmTr_v1... | Clavaminate synthase-like protein At3g21360... | 0.05 | Archaeplastida | |
| GSVIVT01011970001 | No alias | Clavaminate synthase-like protein At3g21360... | 0.02 | Archaeplastida | |
| Gb_16262 | No alias | Clavaminate synthase-like protein At3g21360... | 0.03 | Archaeplastida | |
| Gb_16281 | No alias | Clavaminate synthase-like protein At3g21360... | 0.03 | Archaeplastida | |
| LOC_Os01g09430.1 | No alias | Clavaminate synthase-like protein At3g21360... | 0.02 | Archaeplastida | |
| LOC_Os08g29510.1 | No alias | Clavaminate synthase-like protein At3g21360... | 0.02 | Archaeplastida | |
| MA_796805g0010 | No alias | Clavaminate synthase-like protein At3g21360... | 0.03 | Archaeplastida | |
| Mp8g00790.1 | No alias | Clavaminate synthase-like protein At3g21360... | 0.02 | Archaeplastida | |
| Smo449061 | No alias | Clavaminate synthase-like protein At3g21360... | 0.04 | Archaeplastida | |
| Zm00001e016597_P001 | No alias | Clavaminate synthase-like protein At3g21360... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| BP | GO:0055114 | oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000976 | transcription regulatory region sequence-specific DNA binding | IEP | Neighborhood |
| MF | GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding | IEP | Neighborhood |
| MF | GO:0001012 | RNA polymerase II regulatory region DNA binding | IEP | Neighborhood |
| MF | GO:0001067 | regulatory region nucleic acid binding | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| MF | GO:0008131 | primary amine oxidase activity | IEP | Neighborhood |
| BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Neighborhood |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Neighborhood |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | Neighborhood |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Neighborhood |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0044212 | transcription regulatory region DNA binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0048038 | quinone binding | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0098599 | palmitoyl hydrolase activity | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003819 | TauD/TfdA-like | 46 | 343 |
| No external refs found! |