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  5. MA_10426277g0030

MA_10426277g0030


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 85.5)


Gene families : OG0001179 (Archaeplastida) Phylogenetic Tree(s): OG0001179_tree ,
OG_05_0000900 (LandPlants) Phylogenetic Tree(s): OG_05_0000900_tree ,
OG_06_0000586 (SeedPlants) Phylogenetic Tree(s): OG_06_0000586_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426277g0030
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
MA_10431735g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_10585g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_132668g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_349334g0010 No alias no hits & (original description: none) 0.12 Archaeplastida
MA_3916g0010 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!