1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10426519g0010

MA_10426519g0010


Description : C2H2 zinc finger transcription factor. component SERRATE of DCL1-HYL1 miRNA biogenesis complex


Gene families : OG0002437 (Archaeplastida) Phylogenetic Tree(s): OG0002437_tree ,
OG_05_0003524 (LandPlants) Phylogenetic Tree(s): OG_05_0003524_tree ,
OG_06_0004189 (SeedPlants) Phylogenetic Tree(s): OG_06_0004189_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426519g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027348001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01037454001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_37971 No alias C2H2 zinc finger transcription factor. component SERRATE... 0.03 Archaeplastida
LOC_Os06g48530.1 No alias C2H2 zinc finger transcription factor. component SERRATE... 0.03 Archaeplastida
Mp1g23090.1 No alias C2H2 zinc finger transcription factor. component SERRATE... 0.04 Archaeplastida
Pp3c25_7680V3.1 No alias C2H2 zinc-finger protein SERRATE (SE) 0.03 Archaeplastida
Solyc01g009090.3.1 No alias C2H2 zinc finger transcription factor. component SERRATE... 0.02 Archaeplastida
Zm00001e013155_P002 No alias C2H2 zinc finger transcription factor. component SERRATE... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007042 Arsenite-R_2 449 580
IPR021933 DUF3546 199 280
No external refs found!