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  5. AT5G10250

AT5G10250 (DOT3)


Aliases : DOT3

Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0003027 (LandPlants) Phylogenetic Tree(s): OG_05_0003027_tree ,
OG_06_0019931 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G10250
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00088320 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At3g50840... 0.03 Archaeplastida
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.05 Archaeplastida
AMTR_s00122p00139490 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
GSVIVT01000146001 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01006403001 No alias BTB/POZ domain-containing protein At3g22104... 0.03 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
GSVIVT01012508001 No alias Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016261001 No alias BTB/POZ domain-containing protein At5g03250... 0.05 Archaeplastida
GSVIVT01017210001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Gb_00052 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_34273 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
LOC_Os01g57230.1 No alias BTB/POZ domain-containing protein At5g03250... 0.03 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g39380.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os12g41910.2 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
MA_10429476g0010 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
MA_9526427g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp2g13430.1 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
Pp3c10_19380V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c21_3700V3.1 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
Pp3c25_4520V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Solyc03g044090.4.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 Archaeplastida
Solyc07g043130.3.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.13 Archaeplastida
Solyc09g074630.3.1 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
Solyc10g047530.2.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.06 Archaeplastida
Solyc11g066730.2.1 No alias BTB/POZ domain-containing protein At3g44820... 0.04 Archaeplastida
Zm00001e003063_P004 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e008748_P001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e009259_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e011959_P001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
Zm00001e016726_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e039269_P001 No alias BTB/POZ domain-containing protein At3g08570... 0.03 Archaeplastida
Zm00001e039271_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
BP GO:0010087 phloem or xylem histogenesis IMP Interproscan
BP GO:0010305 leaf vascular tissue pattern formation IMP Interproscan
BP GO:0010588 cotyledon vascular tissue pattern formation IMP Interproscan
BP GO:0048367 shoot system development IMP Interproscan
BP GO:0080022 primary root development IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009269 response to desiccation IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
CC GO:0009528 plastid inner membrane IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009657 plastid organization IEP Neighborhood
BP GO:0009658 chloroplast organization IEP Neighborhood
CC GO:0009706 chloroplast inner membrane IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010118 stomatal movement IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
CC GO:0031969 chloroplast membrane IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
CC GO:0042170 plastid membrane IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043425 bHLH transcription factor binding IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 214 463
No external refs found!