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  5. MA_10426836g0010

MA_10426836g0010


Description : component BAF255/170 of chromatin remodeling complex


Gene families : OG0000902 (Archaeplastida) Phylogenetic Tree(s): OG0000902_tree ,
OG_05_0002793 (LandPlants) Phylogenetic Tree(s): OG_05_0002793_tree ,
OG_06_0008331 (SeedPlants) Phylogenetic Tree(s): OG_06_0008331_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426836g0010
Cluster HCCA: Cluster_492

Target Alias Description ECC score Gene Family Method Actions
AT4G34430 CHB3, ATSWI3D DNA-binding family protein 0.02 Archaeplastida
GSVIVT01008584001 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
GSVIVT01008831001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01031951001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
LOC_Os04g01970.1 No alias component BAF255/170 of chromatin remodeling complex 0.03 Archaeplastida
LOC_Os12g07730.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Pp3c10_9060V3.1 No alias SWITCH/sucrose nonfermenting 3C 0.03 Archaeplastida
Pp3c16_6830V3.1 No alias DNA-binding family protein 0.03 Archaeplastida
Smo442222 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
Zm00001e012143_P002 No alias component BAF255/170 of chromatin remodeling complex 0.03 Archaeplastida
Zm00001e018409_P001 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR007526 SWIRM 2 51
IPR032451 SMARCC_C 429 505
IPR001005 SANT/Myb 200 238
No external refs found!