AT5G10650

Description : RING/U-box superfamily protein

Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0000151 (LandPlants) Phylogenetic Tree(s): OG_05_0000151_tree ,
OG_06_0000175 (SeedPlants) Phylogenetic Tree(s): OG_06_0000175_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G10650

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01008838001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	Archaeplastida
GSVIVT01022103001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	Archaeplastida
GSVIVT01022106001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	Archaeplastida
MA_818744g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_8313423g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc12g010500.3.1	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006914	autophagy	RCA	Interproscan
BP	GO:0007165	signal transduction	RCA	Interproscan
BP	GO:0007568	aging	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010260	animal organ senescence	RCA	Interproscan
BP	GO:0032502	developmental process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	474	516

External Links

No external refs found!