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  5. MA_10427147g0010

MA_10427147g0010


Description : component RPL12 of LSU proteome component


Gene families : OG0002167 (Archaeplastida) Phylogenetic Tree(s): OG0002167_tree ,
OG_05_0002069 (LandPlants) Phylogenetic Tree(s): OG_05_0002069_tree ,
OG_06_0002451 (SeedPlants) Phylogenetic Tree(s): OG_06_0002451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427147g0010
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00048810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 Archaeplastida
AMTR_s00148p00026900 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
AT2G37190 No alias Ribosomal protein L11 family protein 0.39 Archaeplastida
AT3G53430 No alias Ribosomal protein L11 family protein 0.14 Archaeplastida
AT5G60670 No alias Ribosomal protein L11 family protein 0.26 Archaeplastida
Cpa|evm.model.tig00001339.27 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
Cre12.g528750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.32 Archaeplastida
GSVIVT01016274001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01025189001 No alias No description available 0.19 Archaeplastida
GSVIVT01025683001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
LOC_Os02g47140.1 No alias component RPL12 of LSU proteome component 0.19 Archaeplastida
LOC_Os04g50990.1 No alias component RPL12 of LSU proteome component 0.38 Archaeplastida
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.38 Archaeplastida
Pp3c15_14410V3.1 No alias Ribosomal protein L11 family protein 0.32 Archaeplastida
Pp3c16_2860V3.1 No alias Ribosomal protein L11 family protein 0.26 Archaeplastida
Pp3c27_660V3.1 No alias Ribosomal protein L11 family protein 0.3 Archaeplastida
Pp3c27_820V3.1 No alias Ribosomal protein L11 family protein 0.02 Archaeplastida
Pp3c6_19290V3.1 No alias Ribosomal protein L11 family protein 0.22 Archaeplastida
Pp3c9_15380V3.1 No alias Ribosomal protein L11 family protein 0.33 Archaeplastida
Smo227409 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Solyc06g075180.1.1 No alias component RPL12 of LSU proteome component 0.22 Archaeplastida
Solyc11g065670.1.1 No alias component RPL12 of LSU proteome component 0.3 Archaeplastida
Solyc11g069440.1.1 No alias component RPL12 of LSU proteome component 0.38 Archaeplastida
Zm00001e007067_P001 No alias component RPL12 of LSU proteome component 0.15 Archaeplastida
Zm00001e008316_P001 No alias component RPL12 of LSU proteome component 0.12 Archaeplastida
Zm00001e023297_P001 No alias component RPL12 of LSU proteome component 0.16 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020783 Ribosomal_L11_C 75 141
IPR020784 Ribosomal_L11_N 10 70
No external refs found!