MA_10427420g0010


Description : Protein argonaute PNH1 OS=Oryza sativa subsp. japonica (sp|q69vd5|pnh1_orysj : 261.0)


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0014918 (LandPlants) Phylogenetic Tree(s): OG_05_0014918_tree ,
OG_06_0019149 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427420g0010
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00203090 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.canonical... 0.07 Archaeplastida
AMTR_s00008p00203230 evm_27.TU.AmTr_v1... Protein argonaute 16 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00122p00122810 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
AT1G31290 AGO3 ARGONAUTE 3 0.03 Archaeplastida
AT1G48410 AGO1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Archaeplastida
AT2G27040 AGO4, OCP11 Argonaute family protein 0.04 Archaeplastida
AT5G21030 No alias PAZ domain-containing protein / piwi domain-containing protein 0.02 Archaeplastida
AT5G43810 PNH, AGO10, ZLL Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Archaeplastida
GSVIVT01015464001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
GSVIVT01037488001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
Gb_13708 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.03 Archaeplastida
LOC_Os03g33650.1 No alias Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g47870.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.03 Archaeplastida
LOC_Os06g39640.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.02 Archaeplastida
MA_123150g0010 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 Archaeplastida
MA_159389g0010 No alias Protein argonaute 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_594g0010 No alias Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_85246g0010 No alias Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp1g23190.1 No alias siRNA-integrating factor (AGO) 0.02 Archaeplastida
Mp6g14610.1 No alias Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Pp3c17_350V3.1 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Archaeplastida
Pp3c18_9600V3.1 No alias Argonaute family protein 0.04 Archaeplastida
Solyc01g008960.3.1 No alias siRNA-integrating factor (AGO) 0.04 Archaeplastida
Solyc01g010970.3.1 No alias Protein argonaute 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g073540.4.1 No alias siRNA-integrating factor (AGO) 0.04 Archaeplastida
Solyc07g049500.3.1 No alias siRNA-integrating factor (AGO) 0.02 Archaeplastida
Solyc09g082830.4.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.06 Archaeplastida
Zm00001e041452_P004 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003165 Piwi 14 238
No external refs found!