MA_10427483g0010


Description : ubiquitin protease (USP7). deubiquitinase (UBP12-13)


Gene families : OG0000966 (Archaeplastida) Phylogenetic Tree(s): OG0000966_tree ,
OG_05_0001134 (LandPlants) Phylogenetic Tree(s): OG_05_0001134_tree ,
OG_06_0001034 (SeedPlants) Phylogenetic Tree(s): OG_06_0001034_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427483g0010
Cluster HCCA: Cluster_491

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00140970 evm_27.TU.AmTr_v1... Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G11910 UBP13 ubiquitin-specific protease 13 0.03 Archaeplastida
AT5G06600 UBP12 ubiquitin-specific protease 12 0.06 Archaeplastida
Cpa|evm.model.tig00000217.46 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00001366.11 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01022498001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
GSVIVT01034603001 No alias Protein degradation.peptidase families.cysteine-type... 0.06 Archaeplastida
GSVIVT01037528001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
LOC_Os07g06950.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 Archaeplastida
LOC_Os11g36470.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
LOC_Os12g30540.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.06 Archaeplastida
MA_75085g0010 No alias deubiquitinase (UBP12-13) 0.04 Archaeplastida
Mp3g15430.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 Archaeplastida
Pp3c11_18780V3.1 No alias ubiquitin-specific protease 12 0.02 Archaeplastida
Solyc11g071700.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
Zm00001e019687_P003 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.04 Archaeplastida
Zm00001e024432_P001 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 Archaeplastida
Zm00001e032871_P004 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 Archaeplastida
Zm00001e039540_P003 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 143 335
IPR002083 MATH/TRAF_dom 417 535
IPR002083 MATH/TRAF_dom 82 123
IPR001394 Peptidase_C19_UCH 555 882
No external refs found!