MA_10427484g0010


Description : transcription factor (HD-ZIP III)


Gene families : OG0000862 (Archaeplastida) Phylogenetic Tree(s): OG0000862_tree ,
OG_05_0000983 (LandPlants) Phylogenetic Tree(s): OG_05_0000983_tree ,
OG_06_0000998 (SeedPlants) Phylogenetic Tree(s): OG_06_0000998_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427484g0010
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017010001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01025193001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01035612001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_02083 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Gb_18240 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Gb_18245 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
LOC_Os03g01890.1 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
LOC_Os03g43930.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
LOC_Os12g41860.1 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e000073_P001 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e005034_P001 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e012408_P002 No alias transcription factor (HD-ZIP III) 0.06 Archaeplastida
Zm00001e018118_P002 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0016073 snRNA metabolic process IEP Neighborhood
BP GO:0016180 snRNA processing IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034472 snRNA 3'-end processing IEP Neighborhood
BP GO:0034477 U6 snRNA 3'-end processing IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043628 ncRNA 3'-end processing IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013978 MEKHLA 662 784
IPR001356 Homeobox_dom 19 56
IPR002913 START_lipid-bd_dom 126 334
No external refs found!