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  5. MA_10428137g0010

MA_10428137g0010


Description : A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0001287 (LandPlants) Phylogenetic Tree(s): OG_05_0001287_tree ,
OG_06_0001319 (SeedPlants) Phylogenetic Tree(s): OG_06_0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428137g0010
Cluster HCCA: Cluster_471

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00026380 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
AT1G01200 RABA3, ATRAB-A3, ATRABA3 RAB GTPase homolog A3 0.02 Archaeplastida
GSVIVT01020651001 No alias Ras-related protein RABA1e OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01033357001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
LOC_Os05g01480.1 No alias A-class RAB GTPase 0.03 Archaeplastida
LOC_Os10g23100.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Pp3c1_28210V3.1 No alias RAB GTPase homolog A2B 0.03 Archaeplastida
Solyc01g096220.3.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Solyc03g118820.4.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Solyc11g010100.2.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Zm00001e000673_P001 No alias A-class RAB GTPase 0.04 Archaeplastida
Zm00001e027669_P001 No alias A-class RAB GTPase 0.04 Archaeplastida
Zm00001e037250_P001 No alias A-class RAB GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0047750 cholestenol delta-isomerase activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 172
No external refs found!