- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : ligand-gated cation channel (GLR)
Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10428186g0010 | |
| Cluster | HCCA: Cluster_430 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00140120 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.02 | Archaeplastida | |
| AMTR_s00019p00179820 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.02 | Archaeplastida | |
| AMTR_s00019p00180640 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.02 | Archaeplastida | |
| AMTR_s00019p00180760 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.03 | Archaeplastida | |
| AMTR_s00019p00186040 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.04 | Archaeplastida | |
| AT2G29110 | GLR2.8, ATGLR2.8 | glutamate receptor 2.8 | 0.03 | Archaeplastida | |
| AT2G29120 | GLR2.7, ATGLR2.7 | glutamate receptor 2.7 | 0.03 | Archaeplastida | |
| AT3G04110 | ATGLR1.1, GLR1.1, GLR1 | glutamate receptor 1.1 | 0.02 | Archaeplastida | |
| AT5G48400 | ATGLR1.2, GLR1.2 | Glutamate receptor family protein | 0.02 | Archaeplastida | |
| GSVIVT01021155001 | No alias | Solute transport.channels.GLR ligand-gated cation channel | 0.03 | Archaeplastida | |
| GSVIVT01030602001 | No alias | Solute transport.channels.GLR ligand-gated cation channel | 0.03 | Archaeplastida | |
| GSVIVT01033129001 | No alias | Solute transport.channels.GLR ligand-gated cation channel | 0.02 | Archaeplastida | |
| GSVIVT01033142001 | No alias | Solute transport.channels.GLR ligand-gated cation channel | 0.03 | Archaeplastida | |
| GSVIVT01033150001 | No alias | Solute transport.channels.GLR ligand-gated cation channel | 0.03 | Archaeplastida | |
| Gb_27767 | No alias | ligand-gated cation channel (GLR) | 0.05 | Archaeplastida | |
| Gb_28362 | No alias | ligand-gated cation channel (GLR) | 0.02 | Archaeplastida | |
| LOC_Os02g54640.1 | No alias | ligand-gated cation channel (GLR) | 0.02 | Archaeplastida | |
| MA_101552g0010 | No alias | ligand-gated cation channel (GLR) | 0.05 | Archaeplastida | |
| MA_10427025g0010 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida | |
| MA_6222576g0010 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida | |
| MA_88153g0010 | No alias | ligand-gated cation channel (GLR) | 0.03 | Archaeplastida | |
| MA_9039812g0010 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida | |
| MA_9796468g0010 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida | |
| MA_9896648g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc04g078860.4.1 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida | |
| Solyc06g063180.3.1 | No alias | ligand-gated cation channel (GLR) | 0.02 | Archaeplastida | |
| Solyc06g063190.3.1 | No alias | ligand-gated cation channel (GLR) | 0.02 | Archaeplastida | |
| Solyc06g063200.2.1 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida | |
| Solyc06g063210.3.1 | No alias | ligand-gated cation channel (GLR) | 0.03 | Archaeplastida | |
| Zm00001e009848_P001 | No alias | ligand-gated cation channel (GLR) | 0.02 | Archaeplastida | |
| Zm00001e023728_P001 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006820 | anion transport | IEP | Neighborhood |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Neighborhood |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
| BP | GO:0009690 | cytokinin metabolic process | IEP | Neighborhood |
| BP | GO:0010817 | regulation of hormone levels | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015689 | molybdate ion transport | IEP | Neighborhood |
| BP | GO:0015698 | inorganic anion transport | IEP | Neighborhood |
| BP | GO:0015711 | organic anion transport | IEP | Neighborhood |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Neighborhood |
| BP | GO:0015743 | malate transport | IEP | Neighborhood |
| BP | GO:0015849 | organic acid transport | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0034754 | cellular hormone metabolic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042445 | hormone metabolic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0046942 | carboxylic acid transport | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001828 | ANF_lig-bd_rcpt | 1 | 348 |
| No external refs found! |