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  5. AT1G21860

AT1G21860 (sks7)


Aliases : sks7

Description : SKU5 similar 7


Gene families : OG0000677 (Archaeplastida) Phylogenetic Tree(s): OG0000677_tree ,
OG_05_0000383 (LandPlants) Phylogenetic Tree(s): OG_05_0000383_tree ,
OG_06_0000772 (SeedPlants) Phylogenetic Tree(s): OG_06_0000772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G21860

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023902001 No alias L-ascorbate oxidase homolog OS=Brassica napus 0.03 Archaeplastida
LOC_Os01g60080.1 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.05 Archaeplastida
MA_10236360g0010 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.04 Archaeplastida
Pp3c26_8090V3.1 No alias SKU5 similar 4 0.05 Archaeplastida
Solyc12g094470.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e012961_P001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e027313_P002 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e031971_P001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004396 hexokinase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
BP GO:0031122 cytoplasmic microtubule organization IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0043622 cortical microtubule organization IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Neighborhood
BP GO:0061013 regulation of mRNA catabolic process IEP Neighborhood
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 377 513
IPR011707 Cu-oxidase_3 35 148
IPR001117 Cu-oxidase 160 296
No external refs found!