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  5. MA_10428377g0020

MA_10428377g0020


Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG0001508 (Archaeplastida) Phylogenetic Tree(s): OG0001508_tree ,
OG_05_0003579 (LandPlants) Phylogenetic Tree(s): OG_05_0003579_tree ,
OG_06_0004227 (SeedPlants) Phylogenetic Tree(s): OG_06_0004227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428377g0020
Cluster HCCA: Cluster_435

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00063640 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT4G38600 UPL3, KAK HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.05 Archaeplastida
AT5G02880 UPL4 ubiquitin-protein ligase 4 0.04 Archaeplastida
Cpa|evm.model.tig00020554.37 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01018731001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01024033001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_07121 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida
Gb_07122 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Gb_20276 No alias monomeric E3 ubiquitin ligase (HECT) 0.06 Archaeplastida
Gb_20278 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
LOC_Os02g01170.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.07 Archaeplastida
LOC_Os05g38830.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
Mp1g24750.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
Solyc01g111530.3.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
Solyc10g055450.2.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
Zm00001e008508_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Zm00001e013385_P003 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
Zm00001e027267_P004 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000569 HECT_dom 1325 1708
No external refs found!