MA_10428571g0010

Description : protein factor (USP39) of U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP)

Gene families : OG0005032 (Archaeplastida) Phylogenetic Tree(s): OG0005032_tree ,
OG_05_0005994 (LandPlants) Phylogenetic Tree(s): OG_05_0005994_tree ,
OG_06_0005981 (SeedPlants) Phylogenetic Tree(s): OG_06_0005981_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10428571g0010
Cluster	HCCA: Cluster_223

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT4G22285	No alias	Ubiquitin C-terminal hydrolases superfamily protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001607	Znf_UBP	105	166

External Links

No external refs found!