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  5. MA_10428603g0020

MA_10428603g0020


Description : pectate lyase


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428603g0020
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AT1G11920 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G14420 AT59 Pectate lyase family protein 0.02 Archaeplastida
AT3G24670 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01003984001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.07 Archaeplastida
MA_103716g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10437227g0020 No alias pectate lyase 0.03 Archaeplastida
MA_185203g0010 No alias pectate lyase 0.04 Archaeplastida
MA_476625g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c1_4040V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Zm00001e040624_P001 No alias pectate lyase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
InterPro domains Description Start Stop
IPR002022 Pec_lyase 168 353
No external refs found!