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  5. MA_10428606g0010

MA_10428606g0010


Description : SCL28/30/33 RNA splicing factor


Gene families : OG0001329 (Archaeplastida) Phylogenetic Tree(s): OG0001329_tree ,
OG_05_0001146 (LandPlants) Phylogenetic Tree(s): OG_05_0001146_tree ,
OG_06_0001172 (SeedPlants) Phylogenetic Tree(s): OG_06_0001172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428606g0010
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.16 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Cre13.g586916 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Zm00001e038130_P001 No alias SCL28/30/33 RNA splicing factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 116 186
No external refs found!