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Description : miRNA nuclease (SDN1)
Gene families : OG0004735 (Archaeplastida) Phylogenetic Tree(s): OG0004735_tree ,
OG_05_0004392 (LandPlants) Phylogenetic Tree(s): OG_05_0004392_tree ,
OG_06_0004819 (SeedPlants) Phylogenetic Tree(s): OG_06_0004819_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10428723g0020 | |
| Cluster | HCCA: Cluster_434 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G67240 | SDN3 | small RNA degrading nuclease 3 | 0.03 | Archaeplastida | |
| Pp3c18_20990V3.1 | No alias | small RNA degrading nuclease 3 | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source | |
|---|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood | |
| MF | GO:0003909 | DNA ligase activity | IEP | Neighborhood | |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Neighborhood | |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood | |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood | |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood | |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood | |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood | |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood | |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood | |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood | |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood | |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood | |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood | |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood | |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood | |
| BP | GO:0006950 | response to stress | IEP | Neighborhood | -0.44 |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood | |
| MF | GO:0008144 | drug binding | IEP | Neighborhood | |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood | |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood | |
| MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood | |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood | |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood | |
| CC | GO:0016459 | myosin complex | IEP | Neighborhood | |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Neighborhood | |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood | |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood | |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood | |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Neighborhood | |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Neighborhood | |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood | |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood | |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood | |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood | |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood | |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood | |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood | |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood | |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood | |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood | |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood | |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood | |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood | |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood | |
| MF | GO:0043168 | anion binding | IEP | Neighborhood | |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood | |
| CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood | |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood | |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood | |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood | |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood | |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood | |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood | |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood | |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood | |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood | |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood | |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |