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  5. MA_10428752g0010

MA_10428752g0010


Description : transcriptional co-repressor (LUG)


Gene families : OG0000691 (Archaeplastida) Phylogenetic Tree(s): OG0000691_tree ,
OG_05_0000885 (LandPlants) Phylogenetic Tree(s): OG_05_0000885_tree ,
OG_06_0001501 (SeedPlants) Phylogenetic Tree(s): OG_06_0001501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428752g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00094620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.LUG... 0.02 Archaeplastida
GSVIVT01002210001 No alias RNA biosynthesis.transcriptional repression.LUG... 0.02 Archaeplastida
GSVIVT01002701001 No alias RNA biosynthesis.transcriptional repression.LUG... 0.03 Archaeplastida
Gb_06853 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
Pp3c2_31650V3.1 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.02 Archaeplastida
Pp3c2_31710V3.1 No alias No annotation 0.03 Archaeplastida
Solyc05g026470.2.1 No alias Transcriptional corepressor LEUNIG OS=Arabidopsis... 0.07 Archaeplastida
Solyc05g026480.2.1 No alias transcriptional co-repressor (LUG) 0.07 Archaeplastida
Zm00001e006449_P002 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
Zm00001e020659_P003 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida
Zm00001e027845_P004 No alias transcriptional co-repressor (LUG) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 421 458
IPR001680 WD40_repeat 341 378
IPR001680 WD40_repeat 509 544
IPR001680 WD40_repeat 300 333
No external refs found!