MA_10428887g0010


Description : transcription factor (LIM)


Gene families : OG0000926 (Archaeplastida) Phylogenetic Tree(s): OG0000926_tree ,
OG_05_0000998 (LandPlants) Phylogenetic Tree(s): OG_05_0000998_tree ,
OG_06_0003083 (SeedPlants) Phylogenetic Tree(s): OG_06_0003083_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428887g0010
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00259550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LIM... 0.02 Archaeplastida
AT1G01780 No alias GATA type zinc finger transcription factor family protein 0.04 Archaeplastida
AT1G10200 WLIM1 GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
AT2G45800 No alias GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
GSVIVT01007812001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.02 Archaeplastida
LOC_Os02g42820.1 No alias transcription factor (LIM) 0.04 Archaeplastida
LOC_Os04g45010.1 No alias transcription factor (LIM) 0.03 Archaeplastida
LOC_Os10g35930.1 No alias transcription factor (LIM) 0.04 Archaeplastida
Solyc01g094320.3.1 No alias transcription factor (LIM) 0.03 Archaeplastida
Solyc08g007940.4.1 No alias transcription factor (LIM) 0.04 Archaeplastida
Solyc08g080740.3.1 No alias transcription factor (LIM) 0.03 Archaeplastida
Solyc10g017520.3.1 No alias transcription factor (LIM) 0.04 Archaeplastida
Solyc11g044740.2.1 No alias transcription factor (LIM) 0.04 Archaeplastida
Zm00001e015234_P001 No alias transcription factor (LIM) 0.02 Archaeplastida
Zm00001e018310_P001 No alias transcription factor (LIM) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 64
IPR001781 Znf_LIM 110 165
No external refs found!