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  5. MA_10429058g0010

MA_10429058g0010


Description : DNA topoisomerase 6 subunit B OS=Arabidopsis thaliana (sp|q9c5v6|top6b_arath : 333.0)


Gene families : OG0006404 (Archaeplastida) Phylogenetic Tree(s): OG0006404_tree ,
OG_05_0007922 (LandPlants) Phylogenetic Tree(s): OG_05_0007922_tree ,
OG_06_0008334 (SeedPlants) Phylogenetic Tree(s): OG_06_0008334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429058g0010
Cluster HCCA: Cluster_510

Target Alias Description ECC score Gene Family Method Actions
Cre01.g019750 No alias DNA topoisomerase 6 subunit B OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g014490.4.1 No alias DNA topoisomerase 6 subunit B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e033688_P003 No alias DNA topoisomerase 6 subunit B OS=Oryza sativa subsp.... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
InterPro domains Description Start Stop
IPR015320 TopoVI_B_transducer 143 198
No external refs found!