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  5. MA_10429118g0010

MA_10429118g0010


Description : type-I-residues E3 ubiquitin ligase (PRT6)


Gene families : OG0002611 (Archaeplastida) Phylogenetic Tree(s): OG0002611_tree ,
OG_05_0004097 (LandPlants) Phylogenetic Tree(s): OG_05_0004097_tree ,
OG_06_0006106 (SeedPlants) Phylogenetic Tree(s): OG_06_0006106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429118g0010
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00210330 evm_27.TU.AmTr_v1... Protein degradation.N-end rule pathway of targeted... 0.03 Archaeplastida
AT5G02310 PRT6 proteolysis 6 0.14 Archaeplastida
GSVIVT01034167001 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana 0.14 Archaeplastida
GSVIVT01034169001 No alias Protein degradation.N-end rule pathway of targeted... 0.17 Archaeplastida
Gb_11947 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.08 Archaeplastida
LOC_Os01g05500.2 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.12 Archaeplastida
MA_767141g0010 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Mp7g16320.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.08 Archaeplastida
Pp3c10_20380V3.1 No alias proteolysis 6 0.09 Archaeplastida
Pp3c3_24510V3.1 No alias proteolysis 6 0.06 Archaeplastida
Pp3c9_4700V3.1 No alias proteolysis 6 0.03 Archaeplastida
Smo438209 No alias Protein degradation.N-end rule pathway of targeted... 0.11 Archaeplastida
Solyc09g010830.4.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.08 Archaeplastida
Solyc10g084760.3.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.03 Archaeplastida
Zm00001e016914_P004 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR003126 Znf_UBR 23 89
No external refs found!