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  5. MA_10429131g0010

MA_10429131g0010


Description : Protein argonaute 1B OS=Oryza sativa subsp. japonica (sp|q7xsa2|ago1b_orysj : 588.0)


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0011222 (LandPlants) Phylogenetic Tree(s): OG_05_0011222_tree ,
OG_06_0018136 (SeedPlants) Phylogenetic Tree(s): OG_06_0018136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429131g0010
Cluster HCCA: Cluster_359

Target Alias Description ECC score Gene Family Method Actions
AT1G48410 AGO1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Archaeplastida
AT1G69440 AGO7, ZIP Argonaute family protein 0.08 Archaeplastida
AT2G27040 AGO4, OCP11 Argonaute family protein 0.03 Archaeplastida
Cre04.g214250 No alias Protein argonaute 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01015464001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
GSVIVT01026268001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 Archaeplastida
GSVIVT01037488001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
Gb_13708 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.05 Archaeplastida
LOC_Os02g45070.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.03 Archaeplastida
LOC_Os03g33650.1 No alias Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_14457g0010 No alias Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_14457g0020 No alias Protein argonaute 4B OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp6g14610.1 No alias Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c19_860V3.1 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Archaeplastida
Smo98227 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
Zm00001e002044_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e004997_P001 No alias Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e011432_P001 No alias Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e029696_P001 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.03 Archaeplastida
Zm00001e037347_P002 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.03 Archaeplastida
Zm00001e041452_P004 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR032472 ArgoL2 313 359
IPR014811 ArgoL1 121 170
IPR003100 PAZ_dom 191 302
IPR032474 Argonaute_N 8 111
No external refs found!