1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10429211g0010

MA_10429211g0010


Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana (sp|q8w4b1|rcf3_arath : 207.0)


Gene families : OG0000393 (Archaeplastida) Phylogenetic Tree(s): OG0000393_tree ,
OG_05_0000380 (LandPlants) Phylogenetic Tree(s): OG_05_0000380_tree ,
OG_06_0005882 (SeedPlants) Phylogenetic Tree(s): OG_06_0005882_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429211g0010
Cluster HCCA: Cluster_492

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00033p00221750 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
GSVIVT01029591001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
Gb_38220 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
LOC_Os01g13470.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
LOC_Os10g35220.1 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g034200.3.1 No alias RNA-binding KH domain-containing protein RCF3... 0.04 Archaeplastida
Solyc03g082980.3.1 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
Solyc11g010840.2.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
Zm00001e010096_P002 No alias KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e030716_P002 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
Zm00001e037033_P001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
Zm00001e039986_P003 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004371 glycerone kinase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 176 226
IPR004088 KH_dom_type_1 259 326
No external refs found!