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  5. MA_10429256g0020

MA_10429256g0020


Description : transcription factor (NDX)


Gene families : OG0003497 (Archaeplastida) Phylogenetic Tree(s): OG0003497_tree ,
OG_05_0002941 (LandPlants) Phylogenetic Tree(s): OG_05_0002941_tree ,
OG_06_0003214 (SeedPlants) Phylogenetic Tree(s): OG_06_0003214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429256g0020
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011024001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_38590 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38591 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g16560.1 No alias transcription factor (NDX) 0.02 Archaeplastida
Zm00001e021086_P004 No alias transcription factor (NDX) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!