Description : component RPS18 of SSU proteome
Gene families : OG0001796 (Archaeplastida) Phylogenetic Tree(s): OG0001796_tree ,
OG_05_0001726 (LandPlants) Phylogenetic Tree(s): OG_05_0001726_tree ,
OG_06_0002411 (SeedPlants) Phylogenetic Tree(s): OG_06_0002411_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_10429265g0010 | |
Cluster | HCCA: Cluster_208 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00178430 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.23 | Archaeplastida | |
AMTR_s00142p00099380 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | Archaeplastida | |
AT1G22780 | RPS18A, PFL, PFL1 | Ribosomal protein S13/S18 family | 0.14 | Archaeplastida | |
AT1G34030 | No alias | Ribosomal protein S13/S18 family | 0.15 | Archaeplastida | |
AT4G09800 | RPS18C | S18 ribosomal protein | 0.15 | Archaeplastida | |
Cre06.g272950 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.34 | Archaeplastida | |
GSVIVT01017975001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.18 | Archaeplastida | |
GSVIVT01034582001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
LOC_Os03g58050.1 | No alias | component RPS18 of SSU proteome | 0.32 | Archaeplastida | |
LOC_Os07g07709.1 | No alias | component RPS18 of SSU proteome | 0.03 | Archaeplastida | |
Mp1g07420.1 | No alias | component RPS18 of SSU proteome | 0.33 | Archaeplastida | |
Mp5g02820.1 | No alias | component RPS18 of SSU proteome | 0.37 | Archaeplastida | |
Pp3c16_2090V3.1 | No alias | Ribosomal protein S13/S18 family | 0.31 | Archaeplastida | |
Pp3c25_1240V3.1 | No alias | Ribosomal protein S13/S18 family | 0.2 | Archaeplastida | |
Pp3c25_1430V3.1 | No alias | Ribosomal protein S13/S18 family | 0.24 | Archaeplastida | |
Pp3c5_2800V3.1 | No alias | Ribosomal protein S13/S18 family | 0.09 | Archaeplastida | |
Pp3c6_21770V3.1 | No alias | Ribosomal protein S13/S18 family | 0.32 | Archaeplastida | |
Pp3c6_21830V3.1 | No alias | Ribosomal protein S13/S18 family | 0.03 | Archaeplastida | |
Smo267619 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
Solyc03g078290.3.1 | No alias | component RPS18 of SSU proteome | 0.38 | Archaeplastida | |
Solyc06g073370.4.1 | No alias | component RPS18 of SSU proteome | 0.27 | Archaeplastida | |
Solyc11g005680.2.1 | No alias | component RPS18 of SSU proteome | 0.14 | Archaeplastida | |
Zm00001e005967_P001 | No alias | component RPS18 of SSU proteome | 0.37 | Archaeplastida | |
Zm00001e011880_P001 | No alias | component RPS18 of SSU proteome | 0.35 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001892 | Ribosomal_S13 | 14 | 142 |
No external refs found! |