AT5G13090


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0003462 (Archaeplastida) Phylogenetic Tree(s): OG0003462_tree ,
OG_05_0002406 (LandPlants) Phylogenetic Tree(s): OG_05_0002406_tree ,
OG_06_0001809 (SeedPlants) Phylogenetic Tree(s): OG_06_0001809_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G13090
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008571001 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003730 mRNA 3'-UTR binding IEP Neighborhood
MF GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEP Neighborhood
MF GO:0004413 homoserine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006566 threonine metabolic process IEP Neighborhood
BP GO:0007568 aging IEP Neighborhood
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009088 threonine biosynthetic process IEP Neighborhood
MF GO:0009917 sterol 5-alpha reductase activity IEP Neighborhood
BP GO:0010268 brassinosteroid homeostasis IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016405 CoA-ligase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016783 sulfurtransferase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
MF GO:0019202 amino acid kinase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030856 regulation of epithelial cell differentiation IEP Neighborhood
MF GO:0033765 steroid dehydrogenase activity, acting on the CH-CH group of donors IEP Neighborhood
BP GO:0034599 cellular response to oxidative stress IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045604 regulation of epidermal cell differentiation IEP Neighborhood
BP GO:0045682 regulation of epidermis development IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0050213 progesterone 5-alpha-reductase activity IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0055088 lipid homeostasis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!