AT5G13580

Description : ABC-2 type transporter family protein

Gene families : OG0002321 (Archaeplastida) Phylogenetic Tree(s): OG0002321_tree ,
OG_05_0001596 (LandPlants) Phylogenetic Tree(s): OG_05_0001596_tree ,
OG_06_0001496 (SeedPlants) Phylogenetic Tree(s): OG_06_0001496_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G13580
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
AT2G37360	No alias	ABC-2 type transporter family protein	0.07	Archaeplastida
AT3G55090	No alias	ABC-2 type transporter family protein	0.06	Archaeplastida
AT3G55100	No alias	ABC-2 type transporter family protein	0.06	Archaeplastida
AT3G55110	No alias	ABC-2 type transporter family protein	0.06	Archaeplastida
GSVIVT01025582001	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
GSVIVT01032625001	No alias	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
Gb_20468	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os01g61940.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os03g17350.1	No alias	subfamily ABCG transporter	0.07	Archaeplastida
MA_10432886g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Pp3c8_17020V3.1	No alias	ABC-2 type transporter family protein	0.03	Archaeplastida
Solyc04g010210.1.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e001269_P001	No alias	subfamily ABCG transporter	0.08	Archaeplastida
Zm00001e019365_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e028790_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e029545_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009624	response to nematode	IEP	Interproscan
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	ISS	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0004805	trehalose-phosphatase activity	IEP	Neighborhood
CC	GO:0005887	integral component of plasma membrane	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
MF	GO:0008515	sucrose transmembrane transporter activity	IEP	Neighborhood
BP	GO:0008643	carbohydrate transport	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
CC	GO:0009705	plant-type vacuole membrane	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0010345	suberin biosynthetic process	IEP	Neighborhood
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015154	disaccharide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015157	oligosaccharide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015766	disaccharide transport	IEP	Neighborhood
BP	GO:0015770	sucrose transport	IEP	Neighborhood
BP	GO:0015772	oligosaccharide transport	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Neighborhood
BP	GO:0030497	fatty acid elongation	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0051119	sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0090447	glycerol-3-phosphate 2-O-acyltransferase activity	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	109	261
IPR013525	ABC_2_trans	423	631

External Links

No external refs found!

AT5G13580

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation