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  5. MA_10429869g0010

MA_10429869g0010


Description : GTPase (Sar1)


Gene families : OG0001825 (Archaeplastida) Phylogenetic Tree(s): OG0001825_tree ,
OG_05_0001675 (LandPlants) Phylogenetic Tree(s): OG_05_0001675_tree ,
OG_06_0001948 (SeedPlants) Phylogenetic Tree(s): OG_06_0001948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429869g0010
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001299.13 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
Cre11.g468300 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
GSVIVT01028107001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.07 Archaeplastida
Mp2g15910.1 No alias GTPase (Sar1) 0.03 Archaeplastida
Pp3c20_15600V3.1 No alias secretion-associated RAS super family 2 0.03 Archaeplastida
Pp3c2_12620V3.1 No alias secretion-associated RAS super family 2 0.03 Archaeplastida
Solyc06g009660.3.1 No alias GTPase (Sar1) 0.03 Archaeplastida
Zm00001e017591_P001 No alias GTPase (Sar1) 0.04 Archaeplastida
Zm00001e026263_P001 No alias GTPase (Sar1) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 77 112
IPR006689 Small_GTPase_ARF/SAR 113 237
No external refs found!