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Description : Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana (sp|q3edf8|ppr28_arath : 432.0)
Gene families : OG0108592 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0092332 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0073111 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10430090g0010 | |
| Cluster | HCCA: Cluster_354 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009581 | detection of external stimulus | IEP | Neighborhood |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009583 | detection of light stimulus | IEP | Neighborhood |
| BP | GO:0009584 | detection of visible light | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| BP | GO:0051606 | detection of stimulus | IEP | Neighborhood |
| CC | GO:0098533 | ATPase dependent transmembrane transport complex | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Neighborhood |
| CC | GO:1904949 | ATPase complex | IEP | Neighborhood |
| CC | GO:1990351 | transporter complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 599 | 629 |
| IPR002885 | Pentatricopeptide_repeat | 48 | 79 |
| IPR002885 | Pentatricopeptide_repeat | 203 | 234 |
| IPR002885 | Pentatricopeptide_repeat | 381 | 429 |
| IPR002885 | Pentatricopeptide_repeat | 640 | 686 |
| IPR002885 | Pentatricopeptide_repeat | 451 | 500 |
| IPR002885 | Pentatricopeptide_repeat | 524 | 570 |
| IPR002885 | Pentatricopeptide_repeat | 241 | 290 |
| IPR002885 | Pentatricopeptide_repeat | 86 | 127 |
| IPR002885 | Pentatricopeptide_repeat | 311 | 360 |
| IPR002885 | Pentatricopeptide_repeat | 707 | 756 |
| No external refs found! |