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Description : component RPP1 of LSU proteome component
Gene families : OG0001913 (Archaeplastida) Phylogenetic Tree(s): OG0001913_tree ,
OG_05_0002230 (LandPlants) Phylogenetic Tree(s): OG_05_0002230_tree ,
OG_06_0002832 (SeedPlants) Phylogenetic Tree(s): OG_06_0002832_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10430200g0010 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00113490 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
| AT1G01100 | No alias | 60S acidic ribosomal protein family | 0.11 | Archaeplastida | |
| AT4G00810 | No alias | 60S acidic ribosomal protein family | 0.17 | Archaeplastida | |
| AT5G47700 | No alias | 60S acidic ribosomal protein family | 0.07 | Archaeplastida | |
| Cre17.g738300 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | Archaeplastida | |
| GSVIVT01019679001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | Archaeplastida | |
| GSVIVT01027436001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
| GSVIVT01038637001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.15 | Archaeplastida | |
| LOC_Os08g02340.1 | No alias | component RPP1 of LSU proteome component | 0.14 | Archaeplastida | |
| Mp3g02890.1 | No alias | component RPP1 of LSU proteome component | 0.06 | Archaeplastida | |
| Mp6g11950.1 | No alias | component RPP1 of LSU proteome component | 0.02 | Archaeplastida | |
| Pp3c14_21510V3.1 | No alias | 60S acidic ribosomal protein family | 0.03 | Archaeplastida | |
| Pp3c17_22190V3.1 | No alias | 60S acidic ribosomal protein family | 0.16 | Archaeplastida | |
| Pp3c1_36220V3.1 | No alias | 60S acidic ribosomal protein family | 0.17 | Archaeplastida | |
| Pp3c20_2800V3.1 | No alias | 60S acidic ribosomal protein family | 0.1 | Archaeplastida | |
| Pp3c23_18100V3.1 | No alias | 60S acidic ribosomal protein family | 0.22 | Archaeplastida | |
| Pp3c8_22380V3.1 | No alias | 60S acidic ribosomal protein family | 0.18 | Archaeplastida | |
| Smo133023 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | Archaeplastida | |
| Solyc01g006160.3.1 | No alias | component RPP1 of LSU proteome component | 0.06 | Archaeplastida | |
| Solyc01g016470.3.1 | No alias | component RPP1 of LSU proteome component | 0.16 | Archaeplastida | |
| Solyc01g104370.4.1 | No alias | component RPP1 of LSU proteome component | 0.07 | Archaeplastida | |
| Zm00001e021844_P001 | No alias | component RPP1 of LSU proteome component | 0.03 | Archaeplastida | |
| Zm00001e029197_P001 | No alias | component RPP1 of LSU proteome component | 0.12 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Neighborhood |
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005666 | RNA polymerase III complex | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0030880 | RNA polymerase complex | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Neighborhood |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Neighborhood |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |