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  5. MA_10430293g0020

MA_10430293g0020


Description : Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana (sp|q6nq83|pp247_arath : 394.0)


Gene families : OG0001630 (Archaeplastida) Phylogenetic Tree(s): OG0001630_tree ,
OG_05_0001046 (LandPlants) Phylogenetic Tree(s): OG_05_0001046_tree ,
OG_06_0000527 (SeedPlants) Phylogenetic Tree(s): OG_06_0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430293g0020
Cluster HCCA: Cluster_547

Target Alias Description ECC score Gene Family Method Actions
MA_10432772g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.04 Archaeplastida
MA_10433091g0010 No alias Pentatricopeptide repeat-containing protein At1g62930,... 0.03 Archaeplastida
MA_122851g0010 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.05 Archaeplastida
MA_89072g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 59 87
IPR002885 Pentatricopeptide_repeat 89 120
IPR002885 Pentatricopeptide_repeat 192 224
IPR002885 Pentatricopeptide_repeat 228 260
IPR002885 Pentatricopeptide_repeat 266 315
IPR002885 Pentatricopeptide_repeat 406 455
IPR002885 Pentatricopeptide_repeat 126 175
IPR002885 Pentatricopeptide_repeat 336 385
IPR002885 Pentatricopeptide_repeat 476 524
No external refs found!