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  5. MA_10430942g0030

MA_10430942g0030


Description : Amino acid transporter AVT1C OS=Arabidopsis thaliana (sp|f4iuw3|avt1c_arath : 169.0)


Gene families : OG0000208 (Archaeplastida) Phylogenetic Tree(s): OG0000208_tree ,
OG_05_0000265 (LandPlants) Phylogenetic Tree(s): OG_05_0000265_tree ,
OG_06_0076505 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430942g0030
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252630 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AMTR_s00010p00252770 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 Archaeplastida
AMTR_s00029p00075260 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01011400001 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
Gb_27840 No alias solute transporter (AAAP) 0.03 Archaeplastida
LOC_Os01g41420.1 No alias solute transporter (AAAP) 0.02 Archaeplastida
LOC_Os04g38680.1 No alias solute transporter (AAAP) 0.02 Archaeplastida
MA_10430942g0010 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_17204g0020 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e008656_P002 No alias solute transporter (AAAP) 0.03 Archaeplastida
Zm00001e039154_P004 No alias solute transporter (AAAP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 20 139
No external refs found!