MA_10431241g0010

Description : component mtRPS13|psRPS13 of small ribosomal subunit proteome. component psRPS13|mtRPS13 of small ribosomal subunit proteome

Gene families : OG0005606 (Archaeplastida) Phylogenetic Tree(s): OG0005606_tree ,
OG_05_0007082 (LandPlants) Phylogenetic Tree(s): OG_05_0007082_tree ,
OG_06_0009507 (SeedPlants) Phylogenetic Tree(s): OG_06_0009507_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10431241g0010
Cluster	HCCA: Cluster_266

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00089340	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.03	Archaeplastida
AT5G14320	No alias	Ribosomal protein S13/S18 family	0.1	Archaeplastida
Cre12.g493950	No alias	Protein biosynthesis.organelle translation...	0.09	Archaeplastida
GSVIVT01008933001	No alias	Protein biosynthesis.organelle translation...	0.05	Archaeplastida
Gb_24491	No alias	component mtRPS13\|psRPS13 of small ribosomal subunit...	0.04	Archaeplastida
LOC_Os03g49710.1	No alias	component mtRPS13\|psRPS13 of small ribosomal subunit...	0.07	Archaeplastida
Mp1g18230.1	No alias	component mtRPS13\|psRPS13 of small ribosomal subunit...	0.08	Archaeplastida
Pp3c15_12110V3.1	No alias	Ribosomal protein S13/S18 family	0.06	Archaeplastida
Pp3c15_12140V3.1	No alias	Ribosomal protein S13/S18 family	0.08	Archaeplastida
Solyc05g005880.2.1	No alias	component mtRPS13\|psRPS13 of small ribosomal subunit...	0.07	Archaeplastida
Zm00001e005396_P004	No alias	component mtRPS13\|psRPS13 of small ribosomal subunit...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0010207	photosystem II assembly	IEP	Neighborhood
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Neighborhood
BP	GO:0015979	photosynthesis	IEP	Neighborhood
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
MF	GO:0051920	peroxiredoxin activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001892	Ribosomal_S13	49	153

External Links

No external refs found!

MA_10431241g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation