1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10431376g0010

MA_10431376g0010


Description : Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana (sp|o49436|pp327_arath : 607.0)


Gene families : OG0000198 (Archaeplastida) Phylogenetic Tree(s): OG0000198_tree ,
OG_05_0000086 (LandPlants) Phylogenetic Tree(s): OG_05_0000086_tree ,
OG_06_0010182 (SeedPlants) Phylogenetic Tree(s): OG_06_0010182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431376g0010
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AT5G64320 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
Gb_05553 No alias group-II intron mitochondrial splicing factor (MISF74) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
MF GO:0032182 ubiquitin-like protein binding IEP Neighborhood
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
MF GO:0043130 ubiquitin binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 621 642
IPR002885 Pentatricopeptide_repeat 141 163
IPR002885 Pentatricopeptide_repeat 586 616
IPR002885 Pentatricopeptide_repeat 201 233
IPR002885 Pentatricopeptide_repeat 309 358
IPR002885 Pentatricopeptide_repeat 449 497
IPR002885 Pentatricopeptide_repeat 239 288
IPR002885 Pentatricopeptide_repeat 519 568
IPR002885 Pentatricopeptide_repeat 379 428
No external refs found!