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MA_10431382g0020


Description : RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana (sp|q9sg02|rdr6_arath : 472.0)


Gene families : OG0000823 (Archaeplastida) Phylogenetic Tree(s): OG0000823_tree ,
OG_05_0003329 (LandPlants) Phylogenetic Tree(s): OG_05_0003329_tree ,
OG_06_0002749 (SeedPlants) Phylogenetic Tree(s): OG_06_0002749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431382g0020
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011643001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01035851001 No alias RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase 0.02 Archaeplastida
Gb_28426 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28429 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28433 No alias ssRNA polymerase (RDR2) 0.03 Archaeplastida
Mp5g06390.1 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e007872_P002 No alias ssRNA polymerase (RDR2) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 409 558
IPR007855 RNA-dep_RNA_pol_euk-typ 561 717
No external refs found!