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  5. MA_10431508g0010

MA_10431508g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 727.0)


Gene families : OG0002360 (Archaeplastida) Phylogenetic Tree(s): OG0002360_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0000277 (SeedPlants) Phylogenetic Tree(s): OG_06_0000277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431508g0010
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AT2G15690 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Gb_02613 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_05982 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_07106 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_10270 No alias RNA editing factor (MEF8). RNA editing factor (BLX) 0.03 Archaeplastida
Gb_13717 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_14391 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
Gb_15797 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.08 Archaeplastida
Gb_18978 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.19 Archaeplastida
Gb_28765 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.12 Archaeplastida
Gb_31111 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_31794 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
Gb_33367 No alias RNA editing factor (OTP82) 0.07 Archaeplastida
Gb_35793 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_38824 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
LOC_Os08g05750.1 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.06 Archaeplastida
MA_121102g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
MA_858608g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Smo107192 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
Smo92492 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 606 730
IPR002885 Pentatricopeptide_repeat 66 95
IPR002885 Pentatricopeptide_repeat 332 377
IPR002885 Pentatricopeptide_repeat 433 479
IPR002885 Pentatricopeptide_repeat 224 253
IPR002885 Pentatricopeptide_repeat 100 129
IPR002885 Pentatricopeptide_repeat 131 160
IPR002885 Pentatricopeptide_repeat 286 311
IPR002885 Pentatricopeptide_repeat 508 531
IPR002885 Pentatricopeptide_repeat 255 284
IPR002885 Pentatricopeptide_repeat 163 192
IPR002885 Pentatricopeptide_repeat 193 223
No external refs found!