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  5. MA_10431534g0030

MA_10431534g0030


Description : scaffold component VCS of mRNA decapping complex


Gene families : OG0001664 (Archaeplastida) Phylogenetic Tree(s): OG0001664_tree ,
OG_05_0002039 (LandPlants) Phylogenetic Tree(s): OG_05_0002039_tree ,
OG_06_0002225 (SeedPlants) Phylogenetic Tree(s): OG_06_0002225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431534g0030
Cluster HCCA: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00131900 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.03 Archaeplastida
AT3G13290 VCR varicose-related 0.02 Archaeplastida
AT3G13300 VCS Transducin/WD40 repeat-like superfamily protein 0.1 Archaeplastida
GSVIVT01014783001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.08 Archaeplastida
Gb_04906 No alias scaffold component VCS of mRNA decapping complex 0.07 Archaeplastida
LOC_Os02g49090.1 No alias scaffold component VCS of mRNA decapping complex 0.03 Archaeplastida
LOC_Os06g19660.1 No alias scaffold component VCS of mRNA decapping complex 0.1 Archaeplastida
MA_10431534g0010 No alias Varicose-related protein OS=Arabidopsis thaliana... 0.1 Archaeplastida
MA_10431534g0020 No alias Enhancer of mRNA-decapping protein 4 OS=Arabidopsis... 0.15 Archaeplastida
Pp3c21_13620V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
Pp3c9_4880V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Archaeplastida
Solyc07g065950.4.1 No alias scaffold component VCS of mRNA decapping complex 0.04 Archaeplastida
Solyc10g005920.4.1 No alias scaffold component VCS of mRNA decapping complex 0.03 Archaeplastida
Zm00001e015689_P001 No alias scaffold component VCS of mRNA decapping complex 0.07 Archaeplastida
Zm00001e023399_P003 No alias scaffold component VCS of mRNA decapping complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!