AT5G15310 (ATMIXTA, MYB16, ATMYB16)

Aliases : ATMIXTA, MYB16, ATMYB16

Description : myb domain protein 16

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0002660 (SeedPlants) Phylogenetic Tree(s): OG_06_0002660_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G15310
Cluster	HCCA: Cluster_216

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00219710	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00010p00261750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00186p00015620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AT3G28910	MYB30, ATMYB30	myb domain protein 30	0.03	Archaeplastida
AT3G47600	ATMYB94, ATMYBCP70, MYB94	myb domain protein 94	0.04	Archaeplastida
AT4G28110	MYB41, AtMYB41	myb domain protein 41	0.03	Archaeplastida
AT5G40330	ATMYBRTF, ATMYB23, MYB23	myb domain protein 23	0.05	Archaeplastida
Cre03.g197100	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01008303001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01008484001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01009032001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01010086001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01016768001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01019410001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01019945001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01032088001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
Gb_01889	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g36460.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g45090.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g52410.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os02g02370.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os02g54520.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os03g04900.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os04g43680.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os04g45060.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os06g14670.1	No alias	transcription factor (MYB)	0.06	Archaeplastida
LOC_Os06g43090.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os07g43580.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os08g05520.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os09g26170.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os09g36730.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_10426901g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10426901g0020	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_10431212g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_10431610g0040	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_128871g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_137453g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_139924g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_14730g0020	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_158319g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_174297g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_2026g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_246142g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_322432g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_3665g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_64405g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_76990g0010	No alias	transcription factor (MYB)	0.06	Archaeplastida
MA_93127g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_948059g0010	No alias	transcription factor (MYB)	0.06	Archaeplastida
MA_97537g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp5g13060.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Mp8g11870.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Pp3c17_7730V3.1	No alias	myb domain protein 55	0.03	Archaeplastida
Pp3c1_1650V3.1	No alias	myb domain protein 105	0.04	Archaeplastida
Solyc01g087130.4.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc01g111500.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc02g067340.4.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc02g067760.4.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc02g086690.3.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc02g088190.4.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc03g025870.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc03g116100.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc03g119370.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc04g014470.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc04g077260.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g009230.3.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc05g014290.4.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc05g053330.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc06g065100.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc08g079270.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc08g081500.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc10g005460.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc10g055410.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e004140_P002	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e005507_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e005823_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e007085_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e007422_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e007904_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e009453_P002	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e009849_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e014925_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e015235_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e015884_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e016583_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e016791_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e023100_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e025867_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e026426_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e027003_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e034072_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e035025_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e036223_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e037956_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e041055_P001	No alias	transcription factor (MYB). transcriptional key...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IMP	Interproscan
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0009751	response to salicylic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046677	response to antibiotic	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0003777	microtubule motor activity	IEP	Neighborhood
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
MF	GO:0008864	formyltetrahydrofolate deformylase activity	IEP	Neighborhood
CC	GO:0009528	plastid inner membrane	IEP	Neighborhood
BP	GO:0009566	fertilization	IEP	Neighborhood
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Neighborhood
BP	GO:0009657	plastid organization	IEP	Neighborhood
BP	GO:0009658	chloroplast organization	IEP	Neighborhood
BP	GO:0009668	plastid membrane organization	IEP	Neighborhood
BP	GO:0009687	abscisic acid metabolic process	IEP	Neighborhood
BP	GO:0009688	abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0010020	chloroplast fission	IEP	Neighborhood
BP	GO:0010027	thylakoid membrane organization	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0015893	drug transport	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0019900	kinase binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
BP	GO:0031425	chloroplast RNA processing	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0042335	cuticle development	IEP	Neighborhood
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0043288	apocarotenoid metabolic process	IEP	Neighborhood
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	Neighborhood
MF	GO:0043424	protein histidine kinase binding	IEP	Neighborhood
BP	GO:0043572	plastid fission	IEP	Neighborhood
MF	GO:0043621	protein self-association	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0048868	pollen tube development	IEP	Neighborhood
BP	GO:0061024	membrane organization	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
BP	GO:1902644	tertiary alcohol metabolic process	IEP	Neighborhood
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	67	112
IPR001005	SANT/Myb	14	61

External Links

No external refs found!

AT5G15310 (ATMIXTA, MYB16, ATMYB16)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation