AT1G03120 (RAB28, ATRAB28)


Aliases : RAB28, ATRAB28

Description : responsive to abscisic acid 28


Gene families : OG0001382 (Archaeplastida) Phylogenetic Tree(s): OG0001382_tree ,
OG_05_0002277 (LandPlants) Phylogenetic Tree(s): OG_05_0002277_tree ,
OG_06_0002008 (SeedPlants) Phylogenetic Tree(s): OG_06_0002008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G03120
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT3G22490 No alias Seed maturation protein 0.03 Archaeplastida
AT3G22500 ATECP31 Seed maturation protein 0.02 Archaeplastida
AT5G53260 No alias Seed maturation protein 0.02 Archaeplastida
LOC_Os03g06360.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 Archaeplastida
LOC_Os03g53620.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g23350.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 Archaeplastida
LOC_Os12g43140.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_216273g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_49897g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g065360.4.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g082110.4.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 Archaeplastida
Zm00001e014959_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005730 nucleolus IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006873 cellular ion homeostasis IMP Interproscan
BP GO:0007275 multicellular organism development ISS Interproscan
BP GO:0009845 seed germination IMP Interproscan
BP GO:0010226 response to lithium ion IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0004047 aminomethyltransferase activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006089 lactate metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008808 cardiolipin synthase activity IEP Neighborhood
BP GO:0009438 methylglyoxal metabolic process IEP Neighborhood
BP GO:0009910 negative regulation of flower development IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030572 phosphatidyltransferase activity IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042182 ketone catabolic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046185 aldehyde catabolic process IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048581 negative regulation of post-embryonic development IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051241 negative regulation of multicellular organismal process IEP Neighborhood
BP GO:0051596 methylglyoxal catabolic process IEP Neighborhood
BP GO:0061727 methylglyoxal catabolic process to lactate IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:2000242 negative regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR007011 SMP 123 181
IPR007011 SMP 58 115
No external refs found!